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Innovate the way we see life | Tomocube Inc. | June 2026

The TomoAnalysis™ workflow, explained from start to finish.

TomoAnalysis™ is Tomocube’s image analysis platform, optimized for label-free 3D holotomography data. It enables researchers to quantify morphological and biophysical parameters of cellular structures — all within a single platform.

To help you master it more easily, we've built a complete video tutorial series covering the full workflow — from setting up your first project to running batch analysis, exporting quantitative results, and refining segmentation.

8 short videos, each covering one step of the workflow. Whether you're just getting started or building a more systematic, reproducible workflow, this series is your guide.

What’s Inside

1. Creating an Analysis Project — set up your first project and choose the right pipeline

2. Setting Worksets — configure your datasets into the units your pipeline runs on

3. Test Run: Pipeline Structure & Execution — validate settings and see a pipeline in action

4. Test Run: Reading Outputs & Checking Quality — interpret results and assess segmentation

5. Adjusting Parameters — fine-tune segmentation and save reproducible presets

6. Running Batch Analysis — apply your settings across all worksets in one pass

7. Reviewing Results & Exporting — review quantitative data and export

8. Refining Results — correct masks with the Mask Editor or re-tune and re-run

Questions about applying this to your own work? Reply anytime — our team is happy to help.