Tomocube

Per-cell dry mass, volume, surface area, sphericity, and morphological parameters, plus tracking of migration and division over time. Components with strong RI contrast, such as lipid content, can be quantified without a label.

TomoAnalysis provides pre-trained segmentation for major structures including cells, nuclei, and lipid droplets, and you can review and correct the results. Performance varies with unusual cell lines or culture conditions, so we recommend checking it on your own sample data first.

TomoAnalysis runs on Windows.

Yes. Holotomography data is not locked in a proprietary environment. TCF datasets can be exported to TIFF or RAW (with MHD) format through TomoAnalysis Viewer, and these formats open in Fiji, Python, Imaris, and other analysis tools.

For specific pipeline integration, contact us with the tools your lab uses.

3D time-lapse holotomography data is large. A single long time-lapse dataset can reach gigabyte scale.

Before purchase, we work through system specification, storage strategy, and data management with you so that long experiments are planned realistically.

TomoAnalysis Viewer is for data review — browsing datasets, exploring 3D structures, and running on-screen measurements such as line profiles and ROI statistics. It also includes Multi View for side-by-side comparison of up to four datasets simultaneously, and a built-in Movie Maker for recording videos with rotation, Z-slice traversal, and time-lapse playback.

TomoAnalysis Viewer does not include advanced analysis features such as AI models, cell segmentation, morphological analysis, or statistical processing. For those capabilities, use TomoAnalysis.

Yes — simply register to activate your license. Enter your name, organization, and email for online activation. No purchase or subscription is required. For restricted network environments, contact info@tomocube.com for an offline activation code.

For analysis features beyond visualization — AI models, segmentation, morphological analysis — use TomoAnalysis, which offers Basic and AI Plus license tiers. An active TomoAnalysis license can also be used to activate TomoAnalysis Viewer.

Download TomoAnalysis Viewer and run the installer on your Windows PC. On first launch, activate online by entering your name, organization, and email. For restricted network environments, contact info@tomocube.com for an offline activation code.

To load data, drag and drop a folder containing TCF (Tomocube Common File) data into the Explorer panel, or select File >Load Sample Data Path to start with the included sample dataset. Double-click any dataset in the Gallery to open it in the Viewer, where you can switch between 2D View, 3D View, Orthogonal View, and Multi View modes to explore your data.

For detailed instructions, refer to the user manual — available under Help > Show Manual in the application.

Click File to open the dropdown, and click Load Sample Data Path. There you will find two sample HT datasets available in your directory.